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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804113.1_cds_XP_016487499.1_7791
CDS Infomation

[gene=LOC107807595] [db_xref=GeneID:107807595] [protein=serine carboxypeptidase-like 42 isoform X2] [protein_id=XP_016487499.1] [location=complement(join(88282..88564,90004..90096,90232..90365,90597..90785,90891..90976,91453..91545,91655..91747,91864..91971,93730..93988))] [gbkey=CDS]
Sequence

ATGCAAATGGGCTTTCATCATCCACTTTTTCTTATAGCATTTGGGTTTATTATTATCTTG
AATATTGGGAATATTAATGTTAATGGACATCCAATAGAAGATCTGGTGGAAAATTTACCA
GGGCAACCAAAAGTTGGGTTTAGACAATATGCTGGATATGTAGATGTAGATGAAAAGGCA
GGGAGAAGTTTGTTTTATTACTTTGTTGAAGCTGAGAAAGATGCTGATAAACTTCCTCTT
ACTCTTTGGCTAAATGGAGGTCCAGGATGTTCGTCAATTGGAGGGGGTGCCTTTACAGAA
TTAGGACCCTTCTTTCCTAGAGGTGATGGCCGTGGTCTTAGAAGAAATACTAAATCTTGG
AATAAAGCATCAAATCTTCTATTTATTGAATCTCCTGCTGGTGTTGGATGGTCTTATTCA
AACAAATCTAGTGATTATACTTGCGGAGATGACCCCACTGCTAAGGATATGCTCACTTTC
ATGCTCAGATGGTACGAAAAGTTTTCAGAATTAAAATCTAAACCTTTGTTCCTTACAGGT
GAAAGTTATGCAGGACATTATATACCACAGTTGGCAAATGTCATACTAGACTACAACAAG
CAGTCCAAGGATTTTAAGTTTAACCTAAAGGGAGTAGCTATTGGAAATCCACTTTTGAGA
CTTGACAGAGATGTTCCAGCAGTGTACGAATATTACTGGTCACATGGAATGATATCAGAT
GAATTATATTTGAGAATTAAAGAACACTGCAATTTTGATGATTATGAATTCCCAGTTCCT
CATAATGAGCCAATCTCATGCAACCAAGCTATTGATGAAGCATATAAAGTTACAAAGATG
AGTGTGGGAGTAGATGTATGTATGACATCTGAAAGATACTTCTATTTCAACCTACCTGAG
GTTCAGAAAGCTCTTCATGCTAATCGCACTAATCTACCTTACGAATGGACCATGTGCAGT
GATGTGCTGAATTACTCTCAATCAGATGGTGACACTGATATGCTTCCGTCTCTCAAAAAC
ATTATTCAACATGATGTTCCTCTTTGGATATTCAGTGGAGATCAAGACTCAGTGGTACCA
ATAATAGGGTCAAGAACATTGGTGCGAGAATTAGCTAATGATTTAAAGATGAAGACAACA
GTAGCATATGGAGCATGGTTTCACAAAGGGCAAGTAGGAGGATGGCAAATTGAATATGGT
GATAAACTCACATTTGCAACAGTAAGAGGAGCTGCTCATATGGTTCCCTACGCACAGCCA
TCTAGAGCTTTGCATCTTTTCAGCTCATTCGTTCATGGAAGAAGATTGCCTAATACCACT
CGTTTTCCCATTTCCTGA

Peptide Sequence

PEP ID

XP_016487499.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like 42 isoform X2 [Nicotiana tabacum]
Sequence

MQMGFHHPLFLIAFGFIIILNIGNINVNGHPIEDLVENLPGQPKVGFRQYAGYVDVDEKA
GRSLFYYFVEAEKDADKLPLTLWLNGGPGCSSIGGGAFTELGPFFPRGDGRGLRRNTKSW
NKASNLLFIESPAGVGWSYSNKSSDYTCGDDPTAKDMLTFMLRWYEKFSELKSKPLFLTG
ESYAGHYIPQLANVILDYNKQSKDFKFNLKGVAIGNPLLRLDRDVPAVYEYYWSHGMISD
ELYLRIKEHCNFDDYEFPVPHNEPISCNQAIDEAYKVTKMSVGVDVCMTSERYFYFNLPE
VQKALHANRTNLPYEWTMCSDVLNYSQSDGDTDMLPSLKNIIQHDVPLWIFSGDQDSVVP
IIGSRTLVRELANDLKMKTTVAYGAWFHKGQVGGWQIEYGDKLTFATVRGAAHMVPYAQP
SRALHLFSSFVHGRRLPNTTRFPIS

Transcript Sequence

Gene sequence data has not been registered.